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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
943
chromatin state
910
accessible chromatin
817
binding sites
683
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
837
September, 2022
333
November, 2021
289
June, 2020
279
February, 2024
165
May, 2021
151
May, 2020
66
January, 2020
56
January, 2021
44
March, 2020
44
November, 2022
30
August, 2021
26
February, 2023
19
April, 2020
14
February, 2021
14
May, 2022
12
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
October, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
2384
bed bed3+
535
bigWig
16
bigBed narrowPeak
bam
3
bed gappedPeak
xls
Organism
2361
Homo sapiens
Biosample type
934
primary cell
763
tissue
566
cell line
140
in vitro differentiated cells
3
stem cell
Organ
372
epithelium
182
connective tissue
141
kidney
135
brain
117
pancreas
114
musculature of body
97
intestine
96
embryo
94
lung
85
heart
82
vasculature
77
limb
70
eye
69
bodily fluid
67
blood
61
uterus
60
blood vessel
58
skin of body
54
large intestine
49
liver
45
extraembryonic component
40
stomach
31
bone element
29
adrenal gland
27
mammary gland
26
small intestine
23
adipose tissue
23
artery
21
placenta
21
prostate gland
20
ureter
17
lymph node
16
esophagus
16
gonad
16
thymus
14
penis
11
skeleton
11
spinal cord
10
pituitary gland
10
spleen
9
ovary
9
thyroid gland
8
lymphoid tissue
8
nerve
7
bronchus
7
lymphatic vessel
7
vein
6
testis
5
bone marrow
5
mouth
4
breast
4
urinary bladder
3
tongue
2
nose
2
vagina
1
trachea
Project
1997
AMP
333
ENCODE
58
T1D
19
LungMap
Genome assembly (visualization)
2383
hg19
677
GRCh38
files.file_type!
bam
xls
BIOSAMPLE
TYPE
2407 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
variant allelic effects
primary cell
fibroblast
4
16
6
endothelial cell
7
15
2
monocyte
2
18
pericyte cell
10
10
CD14-positive monocyte
19
+ See 273 more…
tissue
heart
20
5
2
retina
3
23
1
kidney
14
10
1
stomach
21
3
pigmented layer of retina
20
+ See 143 more…
cell line
HeLa-S3
55
H1-hESC
39
1
K562
23
1
A549
19
1
HFFc6
19
+ See 244 more…
in vitro differentiated cells
neural progenitor cell
5
10
hematopoietic multipotent progenitor cell
10
1
adipocyte
6
4
embryonic stem cell
1
6
dendritic cell
6
+ See 54 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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