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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1624
candidate regulatory elements
1300
target gene predictions
953
histone modifications
917
chromatin state
897
accessible chromatin
772
binding sites
681
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
276
June, 2020
222
November, 2021
133
May, 2020
105
February, 2024
65
January, 2020
44
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
February, 2021
12
November, 2019
9
October, 2019
4
January, 2022
3
October, 2022
3
September, 2018
3
September, 2022
2
November, 2020
1
June, 2021
Available data
1014
bed bed3+
532
bigWig
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
xls
Organism
991
Homo sapiens
Biosample type
561
primary cell
244
tissue
156
cell line
75
in vitro differentiated cells
Organ
250
epithelium
104
connective tissue
73
pancreas
66
kidney
61
eye
59
brain
51
vasculature
36
heart
35
blood vessel
34
musculature of body
28
limb
28
liver
24
intestine
16
lung
15
artery
15
bone element
14
skin of body
blood
12
bodily fluid
12
embryo
10
adipose tissue
10
large intestine
10
stomach
9
extraembryonic component
8
adrenal gland
8
lymph node
8
mammary gland
8
skeleton
7
ureter
6
esophagus
6
prostate gland
5
gonad
5
nerve
4
bronchus
4
lymphatic vessel
4
placenta
3
penis
3
small intestine
3
thyroid gland
3
uterus
3
vein
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
1
breast
1
mouth
1
nose
tongue
1
trachea
1
urinary bladder
Project
766
AMP
222
ENCODE
30
T1D
19
LungMap
Genome assembly (visualization)
1013
hg19
392
GRCh38
files.file_type!
xls
organ_slims!
blood
tongue
BIOSAMPLE
TYPE
1037 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
variant allelic effects
primary cell
fibroblast
16
6
monocyte
18
endothelial cell
15
2
macrophage
12
3
excitatory neuron
12
+ See 229 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
heart
5
2
islet of Langerhans
6
1
+ See 99 more…
cell line
EndoC_BH1
8
1
HepG2
2
MIN6
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 138 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 34 more…
See all biosamples
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