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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1636
candidate regulatory elements
1336
target gene predictions
974
histone modifications
924
chromatin state
902
accessible chromatin
814
binding sites
681
gene expression
167
differential activity
138
variant allelic effects
71
Fine-mapped variants
69
eQTL
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
286
June, 2020
220
November, 2021
131
May, 2020
105
February, 2024
64
January, 2020
44
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
19
April, 2020
14
May, 2022
12
February, 2021
11
November, 2019
9
October, 2019
6
September, 2022
January, 2022
3
October, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1014
bed bed3+
524
bigWig
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
994
Homo sapiens
Biosample type
561
primary cell
239
tissue
167
cell line
72
in vitro differentiated cells
Organ
253
epithelium
104
connective tissue
76
pancreas
66
kidney
61
eye
58
brain
51
vasculature
36
heart
35
blood vessel
34
musculature of body
28
limb
28
liver
24
intestine
16
lung
15
artery
15
bone element
14
skin of body
12
blood
12
bodily fluid
12
embryo
10
adipose tissue
10
large intestine
10
stomach
9
extraembryonic component
8
adrenal gland
8
lymph node
8
mammary gland
8
skeleton
7
ureter
6
esophagus
6
prostate gland
5
gonad
nerve
4
bronchus
4
lymphatic vessel
placenta
3
penis
3
small intestine
3
thyroid gland
3
uterus
3
vein
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
771
AMP
220
ENCODE
30
T1D
19
LungMap
Genome assembly (visualization)
1016
hg19
384
GRCh38
month_released!
January, 2022
organ_slims!
nerve
placenta
BIOSAMPLE
TYPE
1040 results
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table-tab-icon
Clear Filters
accessible chromatin
variant allelic effects
primary cell
fibroblast
16
6
monocyte
18
endothelial cell
15
2
macrophage
12
3
excitatory neuron
12
+ See 227 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
heart
5
2
islet of Langerhans
6
1
+ See 98 more…
cell line
EndoC_BH1
8
1
HepG2
2
MIN6
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 149 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 31 more…
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