Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1596
candidate regulatory elements
1278
target gene predictions
952
histone modifications
903
chromatin state
890
accessible chromatin
770
binding sites
678
gene expression
168
eQTL
165
differential activity
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
275
June, 2020
214
November, 2021
133
May, 2020
104
February, 2024
65
January, 2020
44
November, 2022
30
August, 2021
28
January, 2021
26
February, 2023
26
May, 2021
18
April, 2020
14
May, 2022
12
February, 2021
12
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
October, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1003
bed bed3+
523
bigWig
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
983
Homo sapiens
Biosample type
554
primary cell
244
tissue
156
cell line
74
in vitro differentiated cells
Organ
253
epithelium
104
connective tissue
76
pancreas
66
kidney
61
eye
59
brain
51
vasculature
36
heart
35
blood vessel
34
musculature of body
28
limb
28
liver
24
intestine
16
lung
15
artery
15
bone element
14
skin of body
blood
12
bodily fluid
12
embryo
10
adipose tissue
10
large intestine
10
stomach
9
extraembryonic component
adrenal gland
8
lymph node
8
mammary gland
8
skeleton
7
ureter
6
esophagus
6
prostate gland
5
gonad
5
nerve
4
bronchus
lymphatic vessel
4
placenta
3
penis
3
small intestine
3
thyroid gland
3
uterus
3
vein
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
767
AMP
214
ENCODE
30
T1D
18
LungMap
Genome assembly (visualization)
1005
hg19
384
GRCh38
organ_slims!
adrenal gland
blood
lymphatic vessel
BIOSAMPLE
TYPE
1029 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
variant allelic effects
primary cell
fibroblast
16
6
monocyte
18
endothelial cell
15
2
macrophage
12
3
excitatory neuron
12
+ See 224 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
heart
5
2
islet of Langerhans
6
1
+ See 99 more…
cell line
EndoC_BH1
8
1
HepG2
2
MIN6
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
+ See 138 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 33 more…
See all biosamples
Download