Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
232
gene expression
190
accessible chromatin
108
target gene predictions
79
differential activity
74
candidate regulatory elements
39
chromatin state
37
variant allelic effects
27
binding sites
23
histone modifications
3
eQTL
2
caQTL
Date released
73
November, 2021
48
February, 2024
21
June, 2020
15
November, 2022
10
February, 2023
10
January, 2021
10
May, 2020
9
January, 2020
8
August, 2021
7
May, 2021
5
October, 2019
4
April, 2020
3
September, 2022
2
May, 2022
1
February, 2021
1
November, 2019
Available data
223
bed bed3+
150
bigWig
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
227
Homo sapiens
Biosample type
174
primary cell
32
tissue
13
cell line
8
in vitro differentiated cells
Organ
253
epithelium
104
connective tissue
76
pancreas
66
kidney
61
eye
59
brain
vasculature
36
heart
35
blood vessel
34
musculature of body
28
limb
28
liver
24
intestine
16
lung
15
artery
15
bone element
14
skin of body
blood
12
bodily fluid
12
embryo
10
adipose tissue
10
large intestine
10
stomach
9
extraembryonic component
8
adrenal gland
8
lymph node
8
mammary gland
8
skeleton
7
ureter
6
esophagus
6
prostate gland
5
gonad
5
nerve
4
bronchus
4
lymphatic vessel
4
placenta
3
penis
3
small intestine
3
thyroid gland
3
uterus
3
vein
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
140
AMP
73
ENCODE
10
T1D
4
LungMap
Genome assembly (visualization)
225
hg19
102
GRCh38
organ_slims!
blood
vasculature
BIOSAMPLE
TYPE
227 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
variant allelic effects
primary cell
endothelial cell
15
2
hepatocyte
8
2
pancreatic beta cell
8
1
pancreatic alpha cell
7
1
pancreatic acinar cell
6
1
+ See 68 more…
tissue
pigmented layer of retina
20
pancreatic ductal cell
2
breast epithelium
1
endothelial cell
1
esophagus squamous epithelium
1
+ See 7 more…
cell line
EndoC_BH1
8
1
glomerular visceral epithelial cell
1
1
epithelial cell of prostate
1
urothelial cell
1
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
mammary gland epithelial cell
1
See all biosamples
Download