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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1420
candidate regulatory elements
1204
target gene predictions
950
histone modifications
833
accessible chromatin
800
binding sites
796
chromatin state
443
gene expression
140
eQTL
123
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
268
June, 2020
213
November, 2021
51
January, 2020
51
May, 2020
49
February, 2024
44
November, 2022
28
January, 2021
26
May, 2021
25
February, 2023
16
April, 2020
August, 2021
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
826
bed bed3+
479
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
tsv
Organism
792
Homo sapiens
Biosample type
447
primary cell
178
tissue
154
cell line
58
in vitro differentiated cells
Organ
204
epithelium
88
connective tissue
67
pancreas
59
eye
42
brain
36
vasculature
kidney
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
579
AMP
213
ENCODE
29
T1D
16
LungMap
Genome assembly (visualization)
828
hg19
349
GRCh38
month_released!
August, 2021
organ_slims!
kidney
lung
BIOSAMPLE
TYPE
837 results
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Clear Filters
accessible chromatin
variant to gene
primary cell
monocyte
18
fibroblast
16
endothelial cell
14
excitatory neuron
12
macrophage
12
+ See 191 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
2
heart
5
pancreas
5
+ See 83 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 139 more…
in vitro differentiated cells
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 28 more…
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