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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1079
target gene predictions
929
chromatin state
863
histone modifications
817
binding sites
614
accessible chromatin
422
gene expression
163
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
4
variant to gene
2
other
2
sQTL
1
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
65
January, 2020
54
May, 2020
48
February, 2024
44
November, 2022
30
August, 2021
May, 2021
25
February, 2023
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
4
January, 2022
3
September, 2018
3
September, 2022
2
November, 2020
1
June, 2021
Available data
607
bed bed3+
246
bigWig
9
bigBed narrowPeak
bam
3
bed gappedPeak
3
xls
Organism
569
Homo sapiens
Biosample type
198
primary cell
196
tissue
156
cell line
64
in vitro differentiated cells
Organ
107
epithelium
55
eye
52
connective tissue
47
kidney
42
brain
33
pancreas
28
vasculature
21
blood vessel
20
heart
20
limb
20
liver
19
musculature of body
13
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
6
lung
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
esophagus
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
614
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
606
hg19
156
GRCh38
files.file_type!
bam
month_released!
May, 2019
May, 2021
BIOSAMPLE
TYPE
614 results
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Clear Filters
accessible chromatin
primary cell
hepatocyte
7
osteoblast
5
endothelial cell
4
endothelial cell of hepatic sinusoid
4
glutamatergic neuron
4
+ See 120 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
heart
5
islet of Langerhans
5
+ See 95 more…
cell line
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 30 more…
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