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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1044
target gene predictions
977
histone modifications
939
chromatin state
811
binding sites
595
accessible chromatin
438
gene expression
159
eQTL
83
variant allelic effects
74
Fine-mapped variants
43
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
65
January, 2020
54
May, 2020
February, 2024
44
November, 2022
30
August, 2021
26
May, 2021
25
February, 2023
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
591
bed bed3+
233
bigWig
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
Organism
550
Homo sapiens
Biosample type
184
primary cell
184
tissue
163
cell line
64
in vitro differentiated cells
Organ
91
epithelium
54
eye
47
kidney
46
connective tissue
42
brain
29
pancreas
24
vasculature
20
heart
20
limb
17
blood vessel
14
musculature of body
13
bone element
12
blood
12
bodily fluid
11
artery
11
liver
10
embryo
10
intestine
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
6
lung
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
esophagus
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
595
AMP
222
ENCODE
19
LungMap
Genome assembly (visualization)
591
hg19
148
GRCh38
month_released!
February, 2024
January, 2021
BIOSAMPLE
TYPE
595 results
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Clear Filters
accessible chromatin
primary cell
monocyte
17
osteoblast
5
glutamatergic neuron
4
regulatory T cell
4
cardiac fibroblast
3
+ See 111 more…
tissue
retina
23
pigmented layer of retina
19
kidney
10
islet of Langerhans
6
heart
5
+ See 85 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 28 more…
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