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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
2638
pQTL
1709
candidate regulatory elements
1218
target gene predictions
977
histone modifications
944
chromatin state
817
binding sites
655
accessible chromatin
518
gene expression
193
eQTL
140
variant allelic effects
84
Fine-mapped variants
53
differential activity
23
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
65
January, 2020
54
May, 2020
48
February, 2024
44
November, 2022
30
August, 2021
26
May, 2021
25
February, 2023
14
May, 2022
12
July, 2025
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
633
bed bed3+
259
bigWig
12
bed bed3
12
bed narrowPeak
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
610
Homo sapiens
Collection Tags
289
ChIP-Atlas
76
CMDGA
76
DGA
33
T2DKP
28
AMP
22
T2DKP
21
T1D
13
BLUEPRINT
12
HPAP
10
T2D
6
ENCODE
Biosample type
226
primary cell
197
tissue
163
cell line
69
in vitro differentiated cells
Organ
118
epithelium
55
eye
53
connective tissue
47
kidney
44
pancreas
42
brain
28
vasculature
23
musculature of body
21
blood vessel
20
heart
20
limb
20
liver
13
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
6
lung
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
esophagus
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
655
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
635
hg19
181
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE
655 results
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Clear Filters
accessible chromatin
primary cell
monocyte
17
hepatocyte
7
endothelial cell
5
osteoblast
5
endothelial cell of hepatic sinusoid
4
+ See 125 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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