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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1709
candidate regulatory elements
1354
target gene predictions
975
histone modifications
943
chromatin state
902
accessible chromatin
814
binding sites
675
gene expression
171
eQTL
164
differential activity
139
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
288
June, 2020
220
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
25
February, 2023
19
April, 2020
19
May, 2021
14
May, 2022
11
February, 2021
11
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
892
bed bed3+
525
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
857
Homo sapiens
Biosample type
482
primary cell
197
tissue
154
cell line
69
in vitro differentiated cells
Organ
204
epithelium
88
connective tissue
59
eye
57
pancreas
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
634
AMP
220
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
894
hg19
389
GRCh38
biosample_term_name!
Caco-2 cell
EndoC_BH1
oligodendrocyte precursor cell
BIOSAMPLE
TYPE
902 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 216 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 95 more…
cell line
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 146 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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