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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
2640
pQTL
1706
candidate regulatory elements
1350
target gene predictions
976
histone modifications
944
chromatin state
897
accessible chromatin
815
binding sites
679
gene expression
188
eQTL
172
differential activity
139
variant allelic effects
84
Fine-mapped variants
11
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
212
November, 2021
65
January, 2020
54
May, 2020
47
February, 2024
44
November, 2022
29
August, 2021
27
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
12
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
887
bed bed3+
514
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
852
Homo sapiens
Collection Tags
289
ChIP-Atlas
245
T2DKP
239
AMP
76
CMDGA
73
DGA
49
T1D
34
T2DKP
13
BLUEPRINT
11
HPAP
9
T2D
5
ENCODE
Biosample type
469
primary cell
196
tissue
163
cell line
69
in vitro differentiated cells
Organ
196
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
638
AMP
212
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
889
hg19
380
GRCh38
biosample_term_name!
endothelial cell
BIOSAMPLE
TYPE
897 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
excitatory neuron
12
macrophage
12
pericyte cell
10
+ See 216 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 94 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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