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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
2640
pQTL
1705
candidate regulatory elements
1353
target gene predictions
973
histone modifications
942
chromatin state
905
accessible chromatin
816
binding sites
676
gene expression
189
eQTL
172
differential activity
139
variant allelic effects
84
Fine-mapped variants
13
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
288
June, 2020
221
November, 2021
64
January, 2020
54
May, 2020
44
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
895
bed bed3+
521
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
860
Homo sapiens
Collection Tags
288
ChIP-Atlas
253
T2DKP
244
AMP
76
CMDGA
71
DGA
50
T1D
36
T2DKP
13
BLUEPRINT
12
HPAP
10
T2D
6
ENCODE
Biosample type
476
primary cell
197
tissue
163
cell line
69
in vitro differentiated cells
Organ
204
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
21
intestine
20
limb
16
liver
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
636
AMP
221
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
897
hg19
385
GRCh38
biosample_term_name!
hepatocyte
BIOSAMPLE
TYPE
905 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 216 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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