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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
2909
target gene predictions
2638
pQTL
1630
candidate regulatory elements
1179
accessible chromatin
900
chromatin state
883
histone modifications
779
binding sites
611
gene expression
484
differential activity
180
eQTL
135
variant allelic effects
74
Fine-mapped variants
25
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
Date released
323
July, 2026
268
June, 2020
222
November, 2021
62
January, 2020
54
May, 2020
44
February, 2024
28
January, 2021
26
November, 2022
25
February, 2023
21
May, 2021
20
August, 2021
19
April, 2020
14
May, 2022
12
July, 2025
11
February, 2021
10
November, 2019
7
October, 2019
6
September, 2022
3
September, 2018
2
November, 2020
1
January, 2022
1
June, 2021
Available data
1164
bed bed3+
516
bigWig
12
bed bed3
12
bed narrowPeak
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1134
Homo sapiens
Collection Tags
268
ChIP-Atlas
251
T2DKP
237
AMP
190
HDMA
133
CATlas
71
DGA
53
CMDGA
50
T1D
36
T2DKP
13
BLUEPRINT
12
HPAP
10
T2D
6
ENCODE
Biosample type
819
primary cell
197
tissue
163
cell line
in vitro differentiated cells
Organ
204
epithelium
192
brain
77
connective tissue
72
eye
65
pancreas
49
kidney
42
heart
38
liver
35
vasculature
33
lung
31
musculature of body
28
skin of body
26
blood vessel
22
muscle organ
21
intestine
20
limb
19
thymus
15
bone element
14
spleen
12
blood
12
bodily fluid
12
embryo
11
adrenal gland
11
artery
10
large intestine
10
thyroid gland
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
6
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
placenta
4
ureter
3
bronchus
3
lymphatic vessel
3
nerve
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
testis
2
vein
1
breast
1
mouth
1
penis
1
tongue
1
trachea
1
urinary bladder
Project
909
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
843
hg19
710
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
1179 results
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Clear Filters
accessible chromatin
primary cell
fibroblast
40
endothelial cell
24
GABAergic neuron
22
macrophage
22
glutamatergic neuron
21
+ See 300 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
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