Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
459
accessible chromatin
448
gene expression
353
target gene predictions
296
candidate regulatory elements
207
histone modifications
180
chromatin state
135
differential activity
84
binding sites
72
variant allelic effects
46
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
217
November, 2021
50
June, 2020
46
May, 2020
28
January, 2021
27
February, 2024
16
April, 2020
14
January, 2020
13
August, 2021
13
May, 2021
13
May, 2022
9
November, 2022
5
October, 2019
3
September, 2022
2
November, 2020
1
February, 2021
1
January, 2022
1
June, 2021
Available data
456
bed bed3+
376
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
414
Homo sapiens
Biosample type
459
primary cell
173
tissue
cell line
68
in vitro differentiated cells
Organ
159
epithelium
62
connective tissue
37
pancreas
vasculature
23
kidney
17
blood vessel
17
liver
17
musculature of body
11
intestine
9
brain
9
lung
7
eye
7
skin of body
6
adrenal gland
6
extraembryonic component
6
heart
5
mammary gland
5
stomach
4
artery
4
embryo
3
bronchus
3
large intestine
3
lymphatic vessel
3
placenta
2
bone element
2
bone marrow
2
esophagus
2
gonad
2
small intestine
2
uterus
2
vein
1
blood
1
bodily fluid
1
ovary
1
penis
1
thymus
1
thyroid gland
1
trachea
Project
217
ENCODE
197
AMP
29
T1D
16
LungMap
Genome assembly (visualization)
458
hg19
265
GRCh38
biosample_type!
cell line
organ_slims!
limb
vasculature
BIOSAMPLE
TYPE
459 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 204 more…
See all biosamples
Download