Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
gene expression
472
accessible chromatin
342
target gene predictions
329
candidate regulatory elements
206
histone modifications
179
chromatin state
152
differential activity
94
binding sites
78
variant allelic effects
46
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
212
November, 2021
51
June, 2020
47
May, 2020
31
February, 2024
28
January, 2021
21
January, 2020
19
April, 2020
13
August, 2021
13
May, 2021
13
May, 2022
9
November, 2022
5
October, 2019
5
September, 2022
2
November, 2020
1
February, 2021
1
January, 2022
1
June, 2021
Available data
469
bed bed3+
384
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
427
Homo sapiens
Biosample type
472
primary cell
194
tissue
161
cell line
65
in vitro differentiated cells
Organ
159
epithelium
62
connective tissue
37
pancreas
25
vasculature
23
kidney
17
blood vessel
17
liver
17
musculature of body
11
intestine
9
brain
9
lung
7
eye
skin of body
6
adrenal gland
6
extraembryonic component
6
heart
5
mammary gland
stomach
4
artery
4
embryo
3
bronchus
3
large intestine
3
lymphatic vessel
3
placenta
2
bone element
2
bone marrow
2
esophagus
2
gonad
2
small intestine
2
uterus
2
vein
1
blood
1
bodily fluid
1
ovary
1
penis
1
thymus
1
thyroid gland
1
trachea
Project
212
AMP
212
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
471
hg19
272
GRCh38
organ_slims!
skin of body
stomach
BIOSAMPLE
TYPE
472 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 207 more…
See all biosamples
Download