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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1578
candidate regulatory elements
1287
target gene predictions
957
histone modifications
876
chromatin state
860
accessible chromatin
799
binding sites
638
gene expression
163
differential activity
157
eQTL
126
variant allelic effects
62
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
279
June, 2020
212
November, 2021
54
January, 2020
54
May, 2020
44
November, 2022
40
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
19
April, 2020
13
May, 2022
9
February, 2021
8
November, 2019
8
October, 2019
4
January, 2022
3
September, 2022
2
November, 2020
2
September, 2018
1
June, 2021
Available data
853
bed bed3+
493
bigWig
9
bigBed narrowPeak
bam
3
bed gappedPeak
xls
Organism
815
Homo sapiens
Biosample type
458
primary cell
176
tissue
157
cell line
69
in vitro differentiated cells
Organ
209
epithelium
88
connective tissue
62
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
heart
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
600
AMP
212
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
852
hg19
353
GRCh38
files.file_type!
bam
xls
organ_slims!
heart
liver
BIOSAMPLE
TYPE
860 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 210 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
pancreas
5
+ See 87 more…
cell line
EndoC_BH1
8
Rh-4 cell
2
786-O cell
1
A-673 cell
1
A172
1
+ See 144 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
See all biosamples
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