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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1635
candidate regulatory elements
1286
target gene predictions
970
histone modifications
926
chromatin state
846
accessible chromatin
804
binding sites
679
gene expression
167
differential activity
167
eQTL
138
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
279
June, 2020
217
November, 2021
63
January, 2020
54
May, 2020
48
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
22
November, 2022
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
4
January, 2022
3
September, 2018
3
September, 2022
2
November, 2020
1
February, 2023
1
June, 2021
Available data
839
bed bed3+
491
bigWig
9
bigBed narrowPeak
bam
3
bed gappedPeak
3
xls
Organism
801
Homo sapiens
Biosample type
472
primary cell
160
cell line
151
tissue
63
in vitro differentiated cells
Organ
209
epithelium
88
connective tissue
62
pancreas
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
581
AMP
217
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
838
hg19
385
GRCh38
files.file_type!
bam
organ_slims!
eye
testis
uterus
BIOSAMPLE
TYPE
846 results
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table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 211 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 145 more…
tissue
kidney
10
islet of Langerhans
6
heart
5
pancreas
5
liver
4
+ See 90 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 29 more…
See all biosamples
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