Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
candidate regulatory elements
88
target gene predictions
75
accessible chromatin
52
chromatin state
50
gene expression
33
differential activity
23
binding sites
19
histone modifications
18
eQTL
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
16
November, 2021
15
February, 2024
12
June, 2020
10
January, 2021
8
May, 2021
6
October, 2019
2
January, 2020
2
May, 2020
2
November, 2019
1
June, 2021
1
September, 2022
Available data
76
bed bed3+
55
bigWig
7
bigBed narrowPeak
3
bam
bed gappedPeak
3
xls
Organism
75
Homo sapiens
Biosample type
41
primary cell
20
tissue
10
cell line
4
in vitro differentiated cells
Organ
209
epithelium
88
connective tissue
62
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
49
AMP
16
ENCODE
10
T1D
Genome assembly (visualization)
75
hg19
38
GRCh38
files.file_type!
bed gappedPeak
BIOSAMPLE
TYPE
75 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
pancreatic beta cell
7
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic ductal cell
6
pancreatic delta cell
4
+ See 8 more…
tissue
islet of Langerhans
6
pancreas
5
pancreatic ductal cell
2
pancreatic stellate cell
2
pancreatic A cell
1
+ See 4 more…
cell line
EndoC_BH1
8
GM23248
1
RPMI7951
1
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
foreskin keratinocyte
1
iPS DF 4.7 Cell Line
1
skin fibroblast
1
See all biosamples
Download