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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1636
candidate regulatory elements
1283
target gene predictions
965
histone modifications
902
chromatin state
827
accessible chromatin
801
binding sites
693
gene expression
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
70
eQTL
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
275
June, 2020
219
November, 2021
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
817
bed bed3+
456
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
782
Homo sapiens
Biosample type
456
primary cell
155
cell line
153
tissue
63
in vitro differentiated cells
Organ
200
epithelium
79
connective tissue
63
pancreas
57
eye
36
kidney
26
vasculature
23
brain
22
liver
22
musculature of body
21
blood vessel
21
intestine
17
heart
15
bone element
15
lung
14
limb
13
skin of body
12
blood
12
bodily fluid
embryo
10
large intestine
9
artery
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
gonad
5
prostate gland
4
adipose tissue
4
esophagus
4
lymphatic vessel
4
placenta
3
bronchus
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
ureter
1
urinary bladder
Project
560
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
819
hg19
323
GRCh38
month_released!
January, 2020
January, 2022
organ_slims!
embryo
gonad
BIOSAMPLE
TYPE
827 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 199 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 140 more…
tissue
retina
22
pigmented layer of retina
20
kidney
8
islet of Langerhans
6
liver
4
+ See 78 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
chondrocyte
5
adipocyte
4
+ See 26 more…
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