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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1710
candidate regulatory elements
1313
target gene predictions
977
histone modifications
944
chromatin state
869
accessible chromatin
816
binding sites
671
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
862
bed bed3+
517
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
824
Homo sapiens
Biosample type
475
primary cell
180
tissue
163
cell line
51
in vitro differentiated cells
Organ
197
epithelium
81
connective tissue
65
pancreas
50
kidney
42
brain
37
eye
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
6
adipose tissue
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
599
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
864
hg19
392
GRCh38
month_released!
July, 2020
March, 2020
November, 2022
BIOSAMPLE
TYPE
869 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 215 more…
tissue
retina
16
pigmented layer of retina
11
kidney
10
islet of Langerhans
6
heart
5
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
5
adipocyte
3
B cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
+ See 26 more…
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