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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1646
candidate regulatory elements
1202
target gene predictions
919
chromatin state
881
accessible chromatin
863
histone modifications
817
binding sites
590
gene expression
167
differential activity
164
eQTL
138
variant allelic effects
74
Fine-mapped variants
13
caQTL
4
variant to gene
3
pQTL
2
other
2
sQTL
1
representative DNase hypersensitivity sites
Date released
286
June, 2020
219
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
871
bed bed3+
512
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
836
Homo sapiens
Biosample type
468
primary cell
193
tissue
156
cell line
64
in vitro differentiated cells
Organ
205
epithelium
88
connective tissue
59
eye
57
pancreas
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
614
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
873
hg19
376
GRCh38
month_released!
May, 2019
May, 2021
organ_slims!
esophagus
ovary
BIOSAMPLE
TYPE
881 results
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Clear Filters
accessible chromatin
primary cell
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
pericyte cell
10
+ See 215 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
heart
5
islet of Langerhans
5
+ See 92 more…
cell line
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 30 more…
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