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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1544
candidate regulatory elements
1241
target gene predictions
969
histone modifications
843
chromatin state
813
accessible chromatin
810
binding sites
657
gene expression
167
differential activity
160
eQTL
61
variant allelic effects
56
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
278
June, 2020
216
November, 2021
May, 2020
50
January, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
19
April, 2020
14
May, 2022
8
October, 2019
7
November, 2019
6
September, 2022
4
February, 2021
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
803
bed bed3+
440
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
813
Homo sapiens
Biosample type
431
primary cell
159
cell line
154
tissue
69
in vitro differentiated cells
Organ
211
epithelium
88
connective tissue
63
pancreas
59
eye
47
kidney
40
brain
35
vasculature
27
musculature of body
heart
25
blood vessel
24
liver
21
intestine
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
1
vein
Project
549
AMP
216
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
805
hg19
349
GRCh38
month_released!
May, 2020
organ_slims!
heart
limb
BIOSAMPLE
TYPE
813 results
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Clear Filters
accessible chromatin
primary cell
fibroblast
16
monocyte
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 199 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
786-O cell
1
A-673 cell
1
+ See 145 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
pancreas
5
islet of Langerhans
4
+ See 71 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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