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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
2640
pQTL
1699
candidate regulatory elements
1349
target gene predictions
972
histone modifications
936
chromatin state
902
accessible chromatin
811
binding sites
680
gene expression
182
eQTL
170
differential activity
137
variant allelic effects
77
Fine-mapped variants
11
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
286
June, 2020
222
November, 2021
63
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
19
April, 2020
14
May, 2022
10
February, 2021
10
November, 2019
9
October, 2019
4
January, 2022
4
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
892
bed bed3+
520
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
857
Homo sapiens
Collection Tags
286
ChIP-Atlas
255
T2DKP
248
AMP
75
CMDGA
75
DGA
50
T1D
36
T2DKP
13
BLUEPRINT
12
HPAP
10
T2D
6
ENCODE
Biosample type
480
primary cell
191
tissue
162
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
632
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
894
hg19
386
GRCh38
organ_slims!
artery
BIOSAMPLE
TYPE
902 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 214 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 93 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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