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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1664
candidate regulatory elements
1329
target gene predictions
970
histone modifications
914
chromatin state
838
accessible chromatin
799
binding sites
655
gene expression
164
eQTL
153
differential activity
130
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
284
June, 2020
217
November, 2021
60
January, 2020
45
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
16
April, 2020
14
May, 2022
10
February, 2021
9
November, 2019
9
October, 2019
8
May, 2020
4
January, 2022
4
September, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
828
bed bed3+
463
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
838
Homo sapiens
Biosample type
419
primary cell
189
tissue
162
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
576
AMP
217
ENCODE
29
T1D
16
LungMap
Genome assembly (visualization)
830
hg19
372
GRCh38
organ_slims!
blood vessel
lymphatic vessel
BIOSAMPLE
TYPE
838 results
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Clear Filters
accessible chromatin
primary cell
fibroblast
16
monocyte
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 193 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 91 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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