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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1685
candidate regulatory elements
1340
target gene predictions
974
histone modifications
930
chromatin state
903
accessible chromatin
812
binding sites
679
gene expression
167
differential activity
166
eQTL
138
variant allelic effects
71
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
284
June, 2020
220
November, 2021
64
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
27
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
11
February, 2021
11
November, 2019
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
893
bed bed3+
523
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
858
Homo sapiens
Biosample type
480
primary cell
192
tissue
162
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
nerve
3
penis
3
small intestine
3
uterus
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
636
AMP
220
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
895
hg19
388
GRCh38
organ_slims!
bone marrow
gonad
nerve
BIOSAMPLE
TYPE
903 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 214 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 92 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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