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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1627
candidate regulatory elements
1322
target gene predictions
962
histone modifications
916
chromatin state
831
accessible chromatin
801
binding sites
657
gene expression
163
differential activity
159
eQTL
135
variant allelic effects
71
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
280
June, 2020
217
November, 2021
63
January, 2020
44
November, 2022
40
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
13
May, 2022
11
November, 2019
9
May, 2020
9
October, 2019
6
September, 2022
4
January, 2022
2
February, 2021
2
November, 2020
2
September, 2018
1
June, 2021
Available data
821
bed bed3+
461
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
831
Homo sapiens
Biosample type
420
primary cell
183
tissue
159
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
566
AMP
217
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
823
hg19
365
GRCh38
organ_slims!
gonad
liver
skeleton
BIOSAMPLE
TYPE
831 results
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Clear Filters
accessible chromatin
primary cell
fibroblast
16
monocyte
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 198 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 84 more…
cell line
EndoC_BH1
8
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 145 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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