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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
gene expression
230
accessible chromatin
192
candidate regulatory elements
170
target gene predictions
101
chromatin state
92
differential activity
47
variant allelic effects
45
binding sites
30
histone modifications
6
Fine-mapped variants
6
eQTL
2
caQTL
Date released
78
November, 2021
31
June, 2020
26
February, 2024
17
January, 2020
15
November, 2022
10
February, 2023
10
January, 2021
8
August, 2021
7
April, 2020
7
May, 2021
6
February, 2021
5
October, 2019
5
September, 2022
2
May, 2022
2
November, 2019
1
May, 2020
Available data
227
bed bed3+
172
bigWig
7
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
230
Homo sapiens
Biosample type
159
primary cell
49
tissue
13
cell line
9
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
135
AMP
78
ENCODE
10
T1D
7
LungMap
Genome assembly (visualization)
229
hg19
127
GRCh38
organ_slims!
nerve
BIOSAMPLE
TYPE
230 results
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accessible chromatin
primary cell
endothelial cell
15
hepatocyte
8
pancreatic beta cell
8
pancreatic alpha cell
7
endothelial cell of hepatic sinusoid
6
+ See 72 more…
tissue
pigmented layer of retina
20
tibial artery
3
muscle of leg
2
pancreatic ductal cell
2
hindlimb muscle
1
+ See 21 more…
cell line
EndoC_BH1
8
GM23248
1
choroid plexus epithelial cell
1
epithelial cell of prostate
1
glomerular visceral epithelial cell
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
dermis microvascular lymphatic vessel endothelial cell
1
foreskin keratinocyte
1
mammary gland epithelial cell
1
See all biosamples
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