Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 59accessible chromatin
  • 18candidate regulatory elements
  • 9chromatin state
  • 9target gene predictions
  • 6binding sites
  • 4histone modifications
  • 2variant allelic effects
  • 1eQTL
  • 1gene expression
Date released
  • 24February, 2023
  • 22November, 2022
  • 6June, 2020
  • 4November, 2021
  • 2January, 2020
  • 1February, 2024
Available data
  • 59bed bed3+
  • 36bigWig
Organism
  • 59Homo sapiens
Collection Tags
  • 47CMDGA
  • 6ChIP-Atlas
  • 4AMP
  • 4T2DKP
Biosample type
  • 44tissue
  • 7primary cell
  • 6in vitro differentiated cells
  • 2cell line
Organ
  • 212epithelium
  • 88connective tissue
  • 65pancreas
  • 59eye
  • 50kidney
  • 42brain
  • 36vasculature
  • 27musculature of body
  • 26blood vessel
  • 26heart
  • 24liver
  • 21intestine
  • 20limb
  • 15bone element
  • 15lung
  • 13skin of body
  • 12blood
  • 12bodily fluid
  • 12embryo
  • 11artery
  • 10large intestine
  • 9extraembryonic component
  • 8lymph node
  • 8skeleton
  • 8stomach
  • 7adipose tissue
  • 7adrenal gland
  • 7mammary gland
  • 5gonad
  • 5prostate gland
  • 4esophagus
  • 4lymphatic vessel
  • 4placenta
  • 4ureter
  • 3bronchus
  • 3nerve
  • 3penis
  • 3small intestine
  • 3uterus
  • 2bone marrow
  • 2lymphoid tissue
  • 2ovary
  • 2spinal cord
  • 2spleen
  • 2testis
  • 2thymus
  • 2thyroid gland
  • 2vein
  • 1breast
  • 1mouth
  • 1nose
  • 1tongue
  • 1trachea
  • 1urinary bladder
Project
  • 55AMP
  • 4ENCODE
Genome assembly (visualization)
  • 59hg19
  • 6GRCh38
BIOSAMPLE
TYPE

59 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
tissue
retina23
pigmented layer of retina20
eye1
primary cell
retinal pigment epithelial cell3
Muller cell2
iris pigment epithelial cell1
retinal bipolar neuron1
in vitro differentiated cells
retinal pigment epithelial cell6
cell line
WERI-Rb-11
fibroblast of the conjunctiva1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego