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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
candidate regulatory elements
80
target gene predictions
74
chromatin state
31
accessible chromatin
11
eQTL
11
gene expression
7
binding sites
7
histone modifications
7
variant allelic effects
6
Fine-mapped variants
6
caQTL
Date released
8
November, 2021
6
June, 2020
5
February, 2024
5
January, 2020
4
July, 2025
3
May, 2022
Available data
27
bed bed3+
16
bigWig
4
bed bed3
4
bed narrowPeak
Organism
31
Homo sapiens
Collection Tags
13
T2DKP
8
AMP
6
ChIP-Atlas
5
DGA
4
T2DKP
3
T2D
Biosample type
21
primary cell
8
tissue
2
cell line
Organ
213
epithelium
193
brain
89
connective tissue
78
eye
65
pancreas
50
kidney
42
heart
38
liver
36
vasculature
33
lung
32
skin of body
31
musculature of body
26
blood vessel
22
muscle organ
21
intestine
20
limb
19
thymus
15
bone element
14
spleen
12
blood
12
bodily fluid
12
embryo
11
adrenal gland
11
artery
10
large intestine
10
thyroid gland
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
testis
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
23
AMP
8
ENCODE
Genome assembly (visualization)
27
hg19
17
GRCh38
Encyclopedia version
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE
31 results
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Clear Filters
accessible chromatin
primary cell
skeletal muscle satellite cell
6
skeletal muscle fiber
5
type I muscle cell
3
type II muscle cell
3
skeletal muscle cell
1
+ See 3 more…
tissue
muscle of leg
2
hindlimb muscle
1
esophagus muscularis mucosa
1
forelimb muscle
1
gastrocnemius medialis
1
+ See 2 more…
cell line
LHCN-M2
1
SJCRH30
1
See all biosamples
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