Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2635pQTL
  • 53candidate regulatory elements
  • 38gene expression
  • 36accessible chromatin
  • 33chromatin state
  • 31target gene predictions
  • 21binding sites
  • 19differential activity
  • 15variant allelic effects
  • 11Fine-mapped variants
  • 10eQTL
  • 8histone modifications
  • 3caQTL
Date released
  • 10January, 2020
  • 6June, 2020
  • 5November, 2021
  • 4February, 2024
  • 3April, 2020
  • 3November, 2019
  • 2September, 2022
  • 1February, 2021
  • 1February, 2023
  • 1May, 2020
Available data
  • 36bed bed3+
  • 26bigWig
Organism
  • 36Homo sapiens
Collection Tags
  • 7AMP
  • 6ChIP-Atlas
  • 6DGA
  • 5T2DKP
  • 1CMDGA
Biosample type
  • 25primary cell
  • 8tissue
  • 2cell line
  • 1in vitro differentiated cells
Organ
  • 212epithelium
  • 88connective tissue
  • 65pancreas
  • 59eye
  • 50kidney
  • 42brain
  • 36vasculature
  • 27musculature of body
  • 26blood vessel
  • 26heart
  • 24liver
  • 21intestine
  • 20limb
  • 15bone element
  • 15lung
  • 13skin of body
  • 12blood
  • 12bodily fluid
  • 12embryo
  • 11artery
  • 10large intestine
  • 9extraembryonic component
  • 8lymph node
  • 8skeleton
  • 8stomach
  • 7adipose tissue
  • 7adrenal gland
  • 7mammary gland
  • 5gonad
  • 5prostate gland
  • 4esophagus
  • 4lymphatic vessel
  • 4placenta
  • 4ureter
  • 3bronchus
  • 3nerve
  • 3penis
  • 3small intestine
  • 3uterus
  • 2bone marrow
  • 2lymphoid tissue
  • 2ovary
  • 2spinal cord
  • 2spleen
  • 2testis
  • 2thymus
  • 2thyroid gland
  • 2vein
  • 1breast
  • 1mouth
  • 1nose
  • 1tongue
  • 1trachea
  • 1urinary bladder
Project
  • 28AMP
  • 5ENCODE
  • 3LungMap
Genome assembly (visualization)
  • 36hg19
  • 25GRCh38
BIOSAMPLE
TYPE

36 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
primary cell
endothelial cell of hepatic sinusoid6
cardiac fibroblast3
endothelial cell of lymphatic vessel3
aortic endothelial cell2
capillary endothelial cell2
tissue
coronary artery3
tibial artery3
ascending aorta1
thoracic aorta1
cell line
choroid plexus epithelial cell1
smooth muscle cell of the coronary artery1
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego