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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1596
candidate regulatory elements
1030
target gene predictions
857
histone modifications
792
binding sites
663
gene expression
458
accessible chromatin
167
differential activity
138
variant allelic effects
74
chromatin state
45
eQTL
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
702
February, 2021
88
October, 2022
3
May, 2021
2
August, 2021
1
March, 2020
1
March, 2023
Available data
793
bed bed3+
Organism
797
Homo sapiens
Biosample type
630
cell line
94
primary cell
38
in vitro differentiated cells
35
tissue
Organ
46
bodily fluid
45
blood
37
epithelium
31
connective tissue
18
skin of body
16
brain
15
vasculature
embryo
12
lymph node
12
mammary gland
10
blood vessel
9
lung
8
bone element
8
prostate gland
7
kidney
7
liver
7
musculature of body
7
pancreas
7
penis
6
artery
eye
6
intestine
6
large intestine
5
heart
4
uterus
3
extraembryonic component
3
gonad
3
placenta
3
testis
3
vein
2
adipose tissue
2
bone marrow
2
bronchus
2
limb
2
lymphatic vessel
2
spinal cord
2
trachea
1
spleen
1
thymus
Project
797
AMP
Genome assembly (visualization)
800
hg19
GRCh38
1
hg18
assembly!
GRCh38
organ_slims!
embryo
eye
BIOSAMPLE
TYPE
797 results
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Clear Filters
binding sites
sQTL
cell line
breast cancer cell
9
melanoma
7
fibroblast cell line
6
prostate cancer cell line
5
glioblastoma multiforme cancer stem cell
4
+ See 491 more…
primary cell
foreskin fibroblast
4
mammary epithelial cell
4
osteoblast
3
aortic adventitial fibroblast
2
bronchial epithelial cell
2
+ See 65 more…
in vitro differentiated cells
T-cell acute lymphoblastic leukemia
3
colon adenocarcinoma
2
neuroblastoma cell line
2
neuronal stem cell
2
BICR 31
1
+ See 28 more…
tissue
islet of Langerhans
2
2
prostate gland
2
adipose tissue
1
brain
1
breast carcinoma
1
+ See 26 more…
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