Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1382candidate regulatory elements
  • 958target gene predictions
  • 753chromatin state
  • 750accessible chromatin
  • 668gene expression
  • 393histone modifications
  • 179eQTL
  • 174binding sites
  • 162differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 144February, 2021
  • 23October, 2022
  • 6February, 2024
  • 1March, 2020
Available data
  • 174bed bed3+
Organism
  • 174Homo sapiens
Collection Tags
  • 144ChIP-Atlas
  • 23ENCODE
  • 6DGA
Biosample type
  • cell line
  • 100primary cell
  • 38in vitro differentiated cells
  • 36tissue
Organ
  • 35epithelium
  • 25connective tissue
  • 17vasculature
  • 14blood vessel
  • 11skin of body
  • 9mammary gland
  • 8liver
  • 7brain
  • 7penis
  • 6musculature of body
  • 5artery
  • 5kidney
  • 4pancreas
  • 3embryo
  • 3extraembryonic component
  • 3eye
  • 3heart
  • 3lung
  • 3placenta
  • 3uterus
  • 2blood
  • 2bodily fluid
  • 2bone element
  • 2bone marrow
  • 2bronchus
  • 2prostate gland
  • 2trachea
  • 2vein
  • 1adipose tissue
  • 1gonad
  • 1intestine
  • 1large intestine
  • 1limb
  • 1lymphatic vessel
  • 1spleen
  • 1testis
  • 1thymus
Project
  • 174AMP
Genome assembly (visualization)
  • 174hg19
  • 6GRCh38
biosample_type!
  • cell line
BIOSAMPLE
TYPE

174 results

search-icontable-tab-icon
Clear Filters
binding sites
primary cell
endothelial cell of hepatic sinusoid6
foreskin fibroblast4
mammary epithelial cell4
osteoblast3
aortic adventitial fibroblast2
in vitro differentiated cells
T-cell acute lymphoblastic leukemia3
colon adenocarcinoma2
neuroblastoma cell line2
neuronal stem cell2
BICR 311
tissue
islet of Langerhans2
prostate gland2
adipose tissue1
brain1
breast carcinoma1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego