Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1355target gene predictions
  • 944chromatin state
  • 902accessible chromatin
  • 872candidate regulatory elements
  • 512gene expression
  • 186eQTL
  • 172differential activity
  • 140variant allelic effects
  • 137histone modifications
  • 99binding sites
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • February, 2021
  • 91October, 2022
  • 6February, 2024
  • 1August, 2021
  • 1March, 2020
Available data
  • 99bed bed3+
Organism
  • 99Homo sapiens
Collection Tags
  • 91ENCODE
  • 7DGA
  • 1AMP
Biosample type
  • 69cell line
  • 29primary cell
  • 1tissue
Organ
  • 19blood
  • 19bodily fluid
  • 11connective tissue
  • 11epithelium
  • 10vasculature
  • 8blood vessel
  • 8liver
  • 6brain
  • 4lung
  • 4skin of body
  • 3mammary gland
  • 2eye
  • 2kidney
  • 2lymph node
  • 2penis
  • 1artery
  • 1bone element
  • 1embryo
  • 1extraembryonic component
  • 1gonad
  • 1intestine
  • 1large intestine
  • 1musculature of body
  • 1pancreas
  • 1placenta
  • 1spinal cord
  • 1testis
  • 1uterus
  • 1vein
Project
  • 99AMP
Genome assembly (visualization)
  • 98hg19
  • 6GRCh38
  • 1hg18
month_released!
  • February, 2021
BIOSAMPLE
TYPE

99 results

search-icontable-tab-icon
Clear Filters
binding sites
cell line
HepG22
A5491
AG04449 cell1
AG04450 cell1
AG09309 cell1
primary cell
endothelial cell of hepatic sinusoid6
erythroblast2
fibroblast of lung2
foreskin fibroblast2
aortic adventitial fibroblast1
tissue
islet of Langerhans1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego