Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1621candidate regulatory elements
  • 1279target gene predictions
  • 952histone modifications
  • 896chromatin state
  • 825accessible chromatin
  • 786binding sites
  • 638gene expression
  • 164eQTL
  • 156differential activity
  • 125variant allelic effects
  • 76Fine-mapped variants
  • 11caQTL
  • 5hQTL
  • 5sQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 698February, 2021
  • 80October, 2022
  • 6February, 2024
  • 1August, 2021
  • 1March, 2020
Available data
  • 786bed bed3+
Organism
  • 786Homo sapiens
Collection Tags
  • 698ChIP-Atlas
  • 80ENCODE
  • 7DGA
  • 1AMP
Biosample type
  • 637cell line
  • 79primary cell
  • 35in vitro differentiated cells
  • 35tissue
Organ
  • 46bodily fluid
  • 45blood
  • 43epithelium
  • connective tissue
  • 21vasculature
  • 18skin of body
  • 16blood vessel
  • 16brain
  • 13embryo
  • 13liver
  • 12lymph node
  • 12mammary gland
  • 9lung
  • 8bone element
  • 8prostate gland
  • 7kidney
  • 7musculature of body
  • 7penis
  • 6artery
  • 6eye
  • 6intestine
  • 6large intestine
  • 5heart
  • 5pancreas
  • 4uterus
  • 3extraembryonic component
  • 3gonad
  • 3placenta
  • 3testis
  • 3vein
  • 2adipose tissue
  • 2bone marrow
  • 2bronchus
  • 2limb
  • 2lymphatic vessel
  • 2spinal cord
  • 2trachea
  • 1spleen
  • 1thymus
Project
  • 786AMP
Genome assembly (visualization)
  • 785hg19
  • 6GRCh38
  • 1hg18
organ_slims!
  • connective tissue
BIOSAMPLE
TYPE

786 results

search-icontable-tab-icon
Clear Filters
binding sites
cell line
breast cancer cell9
melanoma7
fibroblast cell line6
prostate cancer cell line5
glioblastoma multiforme cancer stem cell4
primary cell
endothelial cell of hepatic sinusoid6
mammary epithelial cell4
aortic adventitial fibroblast2
bronchial epithelial cell2
endothelial cell2
in vitro differentiated cells
T-cell acute lymphoblastic leukemia3
colon adenocarcinoma2
neuroblastoma cell line2
neuronal stem cell2
BICR 311
tissue
islet of Langerhans2
prostate gland2
brain1
breast carcinoma1
caput epididymis1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego