Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1593
candidate regulatory elements
1278
target gene predictions
929
histone modifications
868
accessible chromatin
868
chromatin state
801
binding sites
662
gene expression
167
differential activity
140
eQTL
121
variant allelic effects
35
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
959
February, 2021
769
September, 2022
171
September, 2023
90
May, 2021
75
February, 2024
49
August, 2021
39
May, 2024
30
February, 2020
29
March, 2024
13
March, 2023
11
March, 2020
9
August, 2018
7
January, 2020
2
January, 2018
1
July, 2020
1
November, 2020
Available data
1593
bed bed3+
619
tsv
108
txt
24
csv
9
bigWig
Organism
2255
Homo sapiens
Biosample type
940
tissue
836
primary cell
327
cell line
152
in vitro differentiated cells
Organ
363
epithelium
361
kidney
157
musculature of body
137
connective tissue
132
lung
brain
116
intestine
99
limb
93
heart
89
vasculature
77
skin of body
72
pancreas
71
large intestine
67
embryo
64
blood vessel
59
extraembryonic component
53
stomach
49
liver
48
bodily fluid
44
blood
37
small intestine
32
adipose tissue
31
ureter
29
adrenal gland
29
bone element
29
placenta
28
mammary gland
28
penis
28
prostate gland
21
lymph node
20
thymus
19
esophagus
19
eye
19
gonad
18
artery
17
spinal cord
16
spleen
11
uterus
10
lymphatic vessel
10
lymphoid tissue
10
testis
9
mouth
9
ovary
9
thyroid gland
nerve
7
vein
6
breast
5
tongue
5
vagina
4
bronchus
4
skeleton
4
urinary bladder
2
bone marrow
1
nose
1
pericardium
1
pituitary gland
Project
2084
AMP
171
KPMP
Genome assembly (visualization)
1605
hg19
48
GRCh38
organ_slims!
brain
nerve
BIOSAMPLE
TYPE
2255 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
tissue
stomach
40
1
heart
37
3
kidney
29
7
lung
33
1
muscle of arm
33
+ See 125 more…
primary cell
common myeloid progenitor, CD34-positive
27
B cell
17
2
epithelial cell of proximal tubule
2
16
glomerular endothelial cell
2
14
hepatocyte
2
13
+ See 250 more…
cell line
A549
21
H1-hESC
1
8
MCF-7
9
EndoC_BH1
8
H9
7
+ See 166 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
1
neural progenitor cell
5
7
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
+ See 42 more…
See all biosamples
Download