Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1550
candidate regulatory elements
1147
target gene predictions
969
histone modifications
881
chromatin state
811
binding sites
632
accessible chromatin
508
gene expression
162
eQTL
136
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
774
September, 2022
97
January, 2022
34
May, 2022
31
August, 2017
26
February, 2020
24
August, 2021
12
February, 2024
9
May, 2019
8
April, 2019
8
May, 2021
6
January, 2020
5
October, 2019
3
February, 2021
3
May, 2020
1
March, 2023
1
November, 2019
Available data
810
bed bed9
46
bed bed3+
40
bigBed bed9
34
bed bed9+
25
tsv
2
bigWig
1
bam
Organism
1042
Homo sapiens
Biosample type
560
tissue
241
primary cell
197
cell line
44
in vitro differentiated cells
1
stem cell
Organ
101
brain
81
kidney
81
musculature of body
72
lung
65
connective tissue
intestine
57
heart
56
epithelium
55
limb
39
vasculature
38
large intestine
38
skin of body
34
blood vessel
34
extraembryonic component
32
pancreas
29
bodily fluid
28
embryo
27
blood
25
liver
25
stomach
23
adipose tissue
21
small intestine
17
placenta
15
adrenal gland
15
bone element
15
mammary gland
14
prostate gland
13
artery
13
ureter
11
gonad
11
thymus
10
esophagus
10
eye
10
penis
10
spinal cord
8
lymph node
7
spleen
6
nerve
6
testis
5
lymphoid tissue
5
mouth
ovary
5
thyroid gland
5
uterus
5
vein
3
breast
3
skeleton
3
vagina
2
bone marrow
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
1
nose
1
pituitary gland
Project
1043
AMP
3
ITG
2
community
Genome assembly (visualization)
941
hg19
932
GRCh38
3
hg18
organ_slims!
intestine
ovary
BIOSAMPLE
TYPE
1043 results
search-icon
table-tab-icon
Clear Filters
chromatin state
eQTL
tissue
heart
21
brain
18
2
stomach
19
1
kidney
16
1
lung
16
1
+ See 119 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
macrophage
7
+ See 103 more…
cell line
A549
18
K562
7
lymphoblastoid cell line
6
MCF-7
5
HeLa-S3
3
+ See 142 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download