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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1623
candidate regulatory elements
1274
target gene predictions
969
histone modifications
912
chromatin state
884
accessible chromatin
797
binding sites
656
gene expression
164
eQTL
155
differential activity
131
variant allelic effects
65
Fine-mapped variants
10
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
834
February, 2021
815
September, 2022
119
May, 2021
72
May, 2020
61
February, 2024
34
August, 2017
34
May, 2022
17
August, 2021
8
April, 2019
8
May, 2019
3
October, 2019
3
October, 2022
2
January, 2020
1
February, 2023
1
November, 2019
Available data
1124
bed bed3+
838
bed bed9
34
bed bed9+
32
bigBed bed9
5
bigWig
4
bigBed narrowPeak
1
bam
Organism
2011
Homo sapiens
Biosample type
774
cell line
623
tissue
469
primary cell
144
in vitro differentiated cells
1
stem cell
Organ
137
brain
122
epithelium
99
kidney
89
connective tissue
88
musculature of body
76
lung
70
intestine
67
heart
60
limb
56
vasculature
52
bodily fluid
49
blood
49
skin of body
blood vessel
41
large intestine
39
embryo
38
extraembryonic component
35
liver
34
pancreas
27
stomach
21
bone element
21
mammary gland
21
prostate gland
20
small intestine
19
placenta
17
artery
16
ureter
15
adrenal gland
15
eye
15
penis
14
adipose tissue
12
lymph node
12
thymus
9
esophagus
9
gonad
8
spinal cord
7
vein
6
lymphoid tissue
6
nerve
6
spleen
uterus
5
testis
5
thyroid gland
4
bone marrow
4
bronchus
4
mouth
4
ovary
3
lymphatic vessel
3
skeleton
2
breast
2
tongue
2
trachea
2
urinary bladder
2
vagina
1
nose
1
pituitary gland
Project
2011
AMP
1
T1D
Genome assembly (visualization)
1997
hg19
942
GRCh38
organ_slims!
blood vessel
uterus
BIOSAMPLE
TYPE
2012 results
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Clear Filters
histone modifications
chromatin state
variant allelic effects
cell line
A549
1
18
breast cancer cell
11
gastric cancer cell
9
K562
1
7
Rhabdomyosarcoma
8
+ See 556 more…
tissue
heart
1
21
2
brain
3
18
1
stomach
1
19
kidney
2
16
1
muscle of arm
16
1
+ See 161 more…
primary cell
monocyte
86
CD8-positive, alpha-beta T cell
30
1
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
+ See 170 more…
in vitro differentiated cells
neural progenitor cell
15
4
hematopoietic multipotent progenitor cell
1
10
adipocyte
1
6
embryonic stem cell
1
5
neuroblastoma cell line
6
+ See 73 more…
stem cell
H1-hESC
1
See all biosamples
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