Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
910
chromatin state
905
accessible chromatin
816
binding sites
124
variant allelic effects
72
Fine-mapped variants
63
eQTL
12
gene expression
6
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
other
2
variant to gene
Date released
840
February, 2021
839
September, 2022
119
May, 2021
35
August, 2017
16
August, 2021
9
May, 2019
8
April, 2019
6
January, 2020
5
February, 2024
5
October, 2019
3
May, 2020
1
November, 2019
Available data
1016
bed bed3+
869
bed bed9
40
bigBed bed9
bed bed9+
2
bigWig
1
bam
Organism
1886
Homo sapiens
Biosample type
768
cell line
600
tissue
380
primary cell
137
in vitro differentiated cells
1
stem cell
Organ
120
brain
83
kidney
81
epithelium
81
musculature of body
75
lung
73
connective tissue
67
intestine
57
heart
52
bodily fluid
52
limb
49
blood
48
skin of body
41
large intestine
41
vasculature
39
embryo
38
extraembryonic component
34
blood vessel
31
liver
25
stomach
23
pancreas
20
bone element
20
mammary gland
20
prostate gland
20
small intestine
19
placenta
15
penis
14
adrenal gland
13
artery
13
eye
13
ureter
12
lymph node
12
thymus
11
adipose tissue
9
gonad
8
spinal cord
7
esophagus
6
lymphoid tissue
6
spleen
6
uterus
6
vein
5
testis
4
mouth
4
nerve
4
ovary
4
thyroid gland
3
bone marrow
3
bronchus
3
lymphatic vessel
3
skeleton
2
breast
2
tongue
2
trachea
2
urinary bladder
2
vagina
1
nose
1
pituitary gland
Project
1886
AMP
Genome assembly (visualization)
1886
hg19
974
GRCh38
files.file_type!
bed bed9+
txt
BIOSAMPLE
TYPE
1886 results
search-icon
table-tab-icon
Clear Filters
histone modifications
chromatin state
cell line
A549
1
18
breast cancer cell
11
gastric cancer cell
9
K562
1
7
Rhabdomyosarcoma
8
+ See 554 more…
tissue
heart
1
21
brain
3
18
stomach
1
19
kidney
2
16
lung
16
+ See 164 more…
primary cell
monocyte
86
CD8-positive, alpha-beta T cell
30
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
+ See 138 more…
in vitro differentiated cells
neural progenitor cell
14
4
hematopoietic multipotent progenitor cell
1
10
adipocyte
1
6
embryonic stem cell
1
5
neuroblastoma cell line
6
+ See 68 more…
stem cell
H1-hESC
1
See all biosamples
Download