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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1632
candidate regulatory elements
1264
target gene predictions
962
histone modifications
908
chromatin state
893
accessible chromatin
792
binding sites
673
gene expression
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
825
February, 2021
804
September, 2022
119
May, 2021
34
August, 2017
34
May, 2022
17
August, 2021
9
May, 2019
8
April, 2019
6
January, 2020
5
February, 2024
5
October, 2019
3
May, 2020
1
November, 2019
Available data
1000
bed bed3+
834
bed bed9
40
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
1870
Homo sapiens
Biosample type
748
cell line
590
tissue
402
primary cell
130
in vitro differentiated cells
Organ
120
brain
83
kidney
81
epithelium
81
musculature of body
75
lung
73
connective tissue
67
intestine
57
heart
52
bodily fluid
52
limb
49
blood
48
skin of body
41
large intestine
41
vasculature
embryo
38
extraembryonic component
34
blood vessel
31
liver
25
stomach
23
pancreas
21
bone element
20
mammary gland
20
prostate gland
20
small intestine
19
placenta
15
penis
14
adrenal gland
13
artery
13
eye
13
ureter
lymph node
12
thymus
11
adipose tissue
9
gonad
8
spinal cord
7
esophagus
6
lymphoid tissue
6
spleen
6
uterus
6
vein
5
testis
4
bone marrow
4
mouth
4
nerve
4
ovary
4
thyroid gland
3
bronchus
3
lymphatic vessel
3
skeleton
2
breast
2
tongue
2
trachea
2
urinary bladder
2
vagina
1
nose
1
pituitary gland
Project
1870
AMP
Genome assembly (visualization)
1869
hg19
939
GRCh38
organ_slims!
embryo
lymph node
BIOSAMPLE
TYPE
1870 results
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Clear Filters
histone modifications
chromatin state
cell line
A549
1
18
breast cancer cell
11
gastric cancer cell
9
K562
1
7
Rhabdomyosarcoma
8
+ See 535 more…
tissue
heart
1
21
brain
3
18
stomach
1
19
kidney
2
16
lung
16
+ See 158 more…
primary cell
monocyte
86
CD8-positive, alpha-beta T cell
30
1
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
+ See 144 more…
in vitro differentiated cells
neural progenitor cell
15
4
hematopoietic multipotent progenitor cell
1
10
adipocyte
1
6
embryonic stem cell
1
5
neuroblastoma cell line
6
+ See 62 more…
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