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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
1277
target gene predictions
970
histone modifications
886
accessible chromatin
870
chromatin state
810
binding sites
672
gene expression
166
differential activity
164
eQTL
133
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
representative DNase hypersensitivity sites
Date released
765
September, 2022
34
May, 2022
32
August, 2017
8
April, 2019
7
May, 2019
6
January, 2020
6
May, 2021
5
February, 2024
4
May, 2020
4
October, 2019
2
November, 2019
Available data
798
bed bed9
39
bed bed3+
37
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
Organism
872
Homo sapiens
Biosample type
444
tissue
195
primary cell
188
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
873
AMP
Genome assembly (visualization)
872
hg19
798
GRCh38
annotation_type!
candidate regulatory elements
representative DNase hypersensitivity sites
organ_slims!
musculature of body
BIOSAMPLE
TYPE
873 results
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Clear Filters
chromatin state
other
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 98 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 82 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 140 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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