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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1639
candidate regulatory elements
1337
target gene predictions
972
histone modifications
926
chromatin state
907
accessible chromatin
812
binding sites
682
gene expression
170
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
815
September, 2022
35
August, 2017
34
May, 2022
9
May, 2019
8
April, 2019
6
January, 2020
5
February, 2024
5
May, 2021
5
October, 2019
3
May, 2020
1
February, 2021
1
November, 2019
Available data
851
bed bed9
40
bed bed3+
40
bigBed bed9
34
bed bed9+
2
bigWig
1
bam
1
tsv
Organism
927
Homo sapiens
Biosample type
495
tissue
196
primary cell
190
cell line
45
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
urinary bladder
2
vagina
1
nose
Project
927
AMP
Genome assembly (visualization)
926
hg19
851
GRCh38
organ_slims!
placenta
trachea
urinary bladder
BIOSAMPLE
TYPE
927 results
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Clear Filters
chromatin state
representative DNase hypersensitivity sites
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 107 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 82 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 142 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 16 more…
stem cell
H1-hESC
1
See all biosamples
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