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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1541
candidate regulatory elements
1129
target gene predictions
945
histone modifications
863
chromatin state
768
binding sites
566
accessible chromatin
456
gene expression
143
eQTL
110
variant allelic effects
59
Fine-mapped variants
36
differential activity
7
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
769
September, 2022
34
May, 2022
27
August, 2017
8
April, 2019
8
May, 2019
5
February, 2024
5
May, 2021
2
January, 2020
2
May, 2020
2
October, 2019
1
November, 2019
Available data
796
bed bed9
34
bed bed9+
32
bed bed3+
30
bigBed bed9
1
bam
1
bigWig
Organism
863
Homo sapiens
Biosample type
483
tissue
188
cell line
155
primary cell
36
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
51
heart
50
limb
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
tongue
2
urinary bladder
2
vagina
1
nose
Project
863
AMP
Genome assembly (visualization)
863
hg19
796
GRCh38
organ_slims!
connective tissue
tongue
vasculature
BIOSAMPLE
TYPE
863 results
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Clear Filters
chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 99 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 140 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 55 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
muscle cell
2
+ See 13 more…
stem cell
H1-hESC
1
See all biosamples
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