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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1312
candidate regulatory elements
972
target gene predictions
767
histone modifications
733
chromatin state
717
binding sites
425
accessible chromatin
205
gene expression
124
eQTL
72
Fine-mapped variants
56
variant allelic effects
6
differential activity
3
pQTL
2
caQTL
2
other
2
variant to gene
1
representative DNase hypersensitivity sites
1
sQTL
Date released
660
September, 2022
28
August, 2017
9
May, 2019
8
April, 2019
7
May, 2022
5
February, 2024
5
May, 2021
4
January, 2020
3
May, 2020
3
October, 2019
1
November, 2019
Available data
692
bed bed9
36
bigBed bed9
34
bed bed3+
7
bed bed9+
2
bigWig
bam
Organism
733
Homo sapiens
Biosample type
497
tissue
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
71
musculature of body
68
brain
68
kidney
66
lung
59
intestine
50
limb
48
heart
36
large intestine
27
bodily fluid
25
blood
25
extraembryonic component
24
embryo
24
stomach
21
connective tissue
20
small intestine
17
pancreas
17
skin of body
16
blood vessel
16
vasculature
15
placenta
14
adrenal gland
14
liver
13
bone element
ureter
11
prostate gland
11
thymus
10
adipose tissue
8
gonad
8
lymph node
7
mammary gland
7
spinal cord
6
artery
6
epithelium
6
esophagus
6
eye
6
spleen
5
lymphoid tissue
4
nerve
4
ovary
4
penis
4
testis
4
thyroid gland
4
uterus
3
mouth
3
skeleton
2
breast
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
733
AMP
Genome assembly (visualization)
733
hg19
692
GRCh38
biosample_type!
primary cell
files.file_type!
bam
month_released!
March, 2023
organ_slims!
ureter
BIOSAMPLE
TYPE
733 results
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Clear Filters
chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 106 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
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