Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1494
candidate regulatory elements
1162
target gene predictions
942
histone modifications
875
accessible chromatin
850
chromatin state
761
binding sites
676
gene expression
167
differential activity
164
eQTL
137
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
2
pQTL
1
representative DNase hypersensitivity sites
Date released
745
September, 2022
34
May, 2022
29
August, 2017
9
May, 2019
8
April, 2019
6
January, 2020
5
February, 2024
5
May, 2021
5
October, 2019
3
May, 2020
1
November, 2019
Available data
781
bed bed9
40
bigBed bed9
34
bed bed3+
34
bed bed9+
2
bigWig
1
bam
Organism
850
Homo sapiens
Biosample type
451
tissue
197
primary cell
157
cell line
44
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
intestine
53
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
ovary
4
testis
4
thyroid gland
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
850
AMP
Genome assembly (visualization)
850
hg19
781
GRCh38
organ_slims!
bodily fluid
intestine
ovary
uterus
BIOSAMPLE
TYPE
850 results
search-icon
table-tab-icon
Clear Filters
chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 96 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 83 more…
cell line
A549
18
MCF-7
5
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
22Rv1
2
+ See 119 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download