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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1530
candidate regulatory elements
1216
target gene predictions
944
histone modifications
834
chromatin state
797
accessible chromatin
772
binding sites
616
gene expression
153
differential activity
144
eQTL
113
variant allelic effects
59
Fine-mapped variants
9
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
747
September, 2022
34
May, 2022
27
August, 2017
8
May, 2019
5
January, 2020
5
May, 2021
3
October, 2019
2
April, 2019
2
May, 2020
1
November, 2019
Available data
772
bed bed9
34
bed bed9+
28
bigBed bed9
27
bed bed3+
1
bam
1
bigWig
Organism
834
Homo sapiens
Biosample type
453
tissue
181
cell line
163
primary cell
36
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
59
intestine
53
epithelium
heart
50
limb
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
33
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
4
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
834
AMP
Genome assembly (visualization)
834
hg19
767
GRCh38
organ_slims!
connective tissue
heart
mammary gland
BIOSAMPLE
TYPE
834 results
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Clear Filters
chromatin state
tissue
stomach
19
brain
18
kidney
16
lung
16
muscle of arm
16
+ See 98 more…
cell line
A549
18
K562
7
HeLa-S3
3
endometrium adenocarcinoma
3
immortal human breast epithelial cell line cell
3
+ See 138 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 60 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
muscle cell
2
+ See 13 more…
stem cell
H1-hESC
1
See all biosamples
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