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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1427
candidate regulatory elements
1145
target gene predictions
940
histone modifications
810
chromatin state
763
binding sites
673
accessible chromatin
411
gene expression
158
eQTL
88
variant allelic effects
70
differential activity
65
Fine-mapped variants
8
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
714
September, 2022
34
May, 2022
28
August, 2017
8
April, 2019
8
May, 2019
5
February, 2024
5
May, 2021
3
October, 2019
2
January, 2020
2
May, 2020
1
November, 2019
Available data
742
bed bed9
34
bed bed9+
33
bed bed3+
32
bigBed bed9
1
bam
1
bigWig
Organism
810
Homo sapiens
Biosample type
432
tissue
187
cell line
147
primary cell
43
in vitro differentiated cells
1
stem cell
Organ
77
kidney
74
musculature of body
72
brain
71
lung
intestine
epithelium
51
heart
50
limb
48
connective tissue
36
large intestine
35
skin of body
33
extraembryonic component
vasculature
28
blood vessel
28
embryo
27
bodily fluid
25
blood
24
stomach
20
small intestine
17
liver
17
pancreas
16
placenta
15
bone element
15
mammary gland
14
adrenal gland
13
prostate gland
13
ureter
11
thymus
10
adipose tissue
10
penis
9
eye
8
artery
8
gonad
8
lymph node
8
spinal cord
7
esophagus
6
spleen
5
lymphoid tissue
5
vein
4
mouth
4
nerve
ovary
4
testis
4
thyroid gland
4
uterus
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
810
AMP
Genome assembly (visualization)
810
hg19
742
GRCh38
organ_slims!
epithelium
intestine
ovary
vasculature
BIOSAMPLE
TYPE
810 results
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Clear Filters
chromatin state
tissue
heart
21
stomach
19
brain
18
kidney
16
lung
16
+ See 90 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 139 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
CD8-positive, alpha-beta memory T cell
7
mature neutrophil
7
+ See 50 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 14 more…
stem cell
H1-hESC
1
See all biosamples
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