Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 88accessible chromatin
  • 88candidate regulatory elements
  • 78target gene predictions
  • 51gene expression
  • 48chromatin state
  • 31binding sites
  • 25eQTL
  • 25histone modifications
  • 16differential activity
  • 16variant allelic effects
  • 8Fine-mapped variants
  • 2caQTL
  • 2pQTL
  • 2sQTL
Date released
  • 40September, 2022
  • 7August, 2017
  • 1October, 2019
Available data
  • 41bed bed9
  • 7bed bed3+
  • 2bigBed bed9
Organism
  • 48Homo sapiens
Collection Tags
  • 40EpiMap
Biosample type
  • 27primary cell
  • 10tissue
  • 8in vitro differentiated cells
  • 3cell line
Organ
  • 77kidney
  • 74musculature of body
  • 72brain
  • 71lung
  • 59intestine
  • 53epithelium
  • 51heart
  • 50limb
  • 48connective tissue
  • 36large intestine
  • 35skin of body
  • 33extraembryonic component
  • 33vasculature
  • 28blood vessel
  • 28embryo
  • 27bodily fluid
  • 25blood
  • 24stomach
  • 20small intestine
  • 17liver
  • 17pancreas
  • 16placenta
  • 15bone element
  • 15mammary gland
  • 14adrenal gland
  • 13prostate gland
  • 13ureter
  • 11thymus
  • 10adipose tissue
  • 10penis
  • 9eye
  • 8artery
  • 8gonad
  • 8lymph node
  • 8spinal cord
  • 7esophagus
  • 6spleen
  • 5lymphoid tissue
  • 5vein
  • 4mouth
  • 4nerve
  • 4ovary
  • 4testis
  • 4thyroid gland
  • 4uterus
  • 3skeleton
  • 2bone marrow
  • 2breast
  • 2bronchus
  • 2lymphatic vessel
  • 2tongue
  • 2urinary bladder
  • 2vagina
  • 1nose
Project
  • 48AMP
Genome assembly (visualization)
  • 48hg19
  • 41GRCh38
BIOSAMPLE
TYPE

48 results

search-icontable-tab-icon
Clear Filters
chromatin state
primary cell
fibroblast of lung4
fibroblast of cardiac tissue3
fibroblast of dermis3
skin fibroblast2
amnion mesenchymal stem cell1
tissue
adipose tissue6
omental fat pad2
subcutaneous abdominal adipose tissue1
subcutaneous adipose tissue1
in vitro differentiated cells
adipocyte6
mesenchymal stem cell2
cell line
GM232481
HT10801
foreskin fibroblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego