Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 833September, 2022
  • 35August, 2017
  • 34May, 2022
  • 9May, 2019
  • 8April, 2019
  • 6January, 2020
  • 5February, 2024
  • 5May, 2021
  • 5October, 2019
  • 3May, 2020
  • 1November, 2019
Available data
  • 869bed bed9
  • 40bed bed3+
  • 40bigBed bed9
  • 34bed bed9+
  • 2bigWig
  • 1bam
Organism
  • 944Homo sapiens
Collection Tags
  • 833EpiMap
  • 34BLUEPRINT
  • 10DGA
  • 2T2DKP
  • 1AMP
Biosample type
  • 511tissue
  • 197primary cell
  • 191cell line
  • 44in vitro differentiated cells
  • 1stem cell
Organ
  • 77kidney
  • 74musculature of body
  • 72brain
  • 71lung
  • 59intestine
  • 53epithelium
  • 51heart
  • 50limb
  • 48connective tissue
  • 36large intestine
  • 35skin of body
  • 33extraembryonic component
  • 33vasculature
  • 28blood vessel
  • 28embryo
  • 27bodily fluid
  • 25blood
  • 24stomach
  • 20small intestine
  • 17liver
  • 17pancreas
  • 16placenta
  • 15bone element
  • 15mammary gland
  • 14adrenal gland
  • 13prostate gland
  • 13ureter
  • 11thymus
  • 10adipose tissue
  • 10penis
  • 9eye
  • 8artery
  • 8gonad
  • 8lymph node
  • 8spinal cord
  • 7esophagus
  • 6spleen
  • 5lymphoid tissue
  • 5vein
  • 4mouth
  • 4nerve
  • 4ovary
  • 4testis
  • 4thyroid gland
  • 4uterus
  • 3skeleton
  • 2bone marrow
  • 2breast
  • 2bronchus
  • 2lymphatic vessel
  • 2tongue
  • 2urinary bladder
  • 2vagina
  • 1nose
Project
  • 944AMP
Genome assembly (visualization)
  • 944hg19
  • 869GRCh38
BIOSAMPLE
TYPE

944 results

search-icontable-tab-icon
Clear Filters
chromatin state
tissue
heart21
stomach19
brain18
kidney16
lung16
primary cell
common myeloid progenitor, CD34-positive13
CD4-positive, alpha-beta memory T cell9
B cell8
CD8-positive, alpha-beta memory T cell7
mature neutrophil7
cell line
A54918
K5627
MCF-75
HeLa-S33
endometrium adenocarcinoma3
in vitro differentiated cells
hematopoietic multipotent progenitor cell10
adipocyte6
embryonic stem cell5
neural progenitor cell4
endodermal cell2
stem cell
H1-hESC1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego