Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 101January, 2022
  • 27August, 2021
  • 26February, 2020
  • 18March, 2025
  • 7February, 2024
  • 3February, 2021
  • 3May, 2021
  • 2May, 2024
  • 1March, 2023
Available data
  • 133bed bed3+
  • 45tsv
Organism
  • 188Homo sapiens
Collection Tags
  • 104T1D
  • 101T2D
  • 101eQTLCatalogue
  • 28AMP
  • 26T2DKP
  • 24GTEx
  • 18STARNET
  • 13 T2DKP
  • 10DGA
  • 3BLUEPRINT
  • 1CMDGA
Biosample type
  • 129tissue
  • 50primary cell
  • 10cell line
Organ
  • 29brain
  • 25connective tissue
  • 17adipose tissue
  • 15pancreas
  • 10blood vessel
  • 10liver
  • 10vasculature
  • 9musculature of body
  • 7artery
  • 6heart
  • 5limb
  • 4blood
  • 4bodily fluid
  • 4kidney
  • 3epithelium
  • 3esophagus
  • 3gonad
  • 3intestine
  • 3skin of body
  • 2large intestine
  • 2nerve
  • 2spinal cord
  • 2testis
  • 1adrenal gland
  • 1breast
  • 1extraembryonic component
  • 1eye
  • 1lung
  • 1mouth
  • 1ovary
  • 1pituitary gland
  • 1placenta
  • 1prostate gland
  • 1small intestine
  • 1spleen
  • 1stomach
  • 1thyroid gland
  • 1uterus
  • 1vagina
Project
  • 184AMP
  • 3ITG
  • 2community
Genome assembly (visualization)
  • 126GRCh38
  • 63hg19
  • 3hg18
annotation_type!
  • binding sites
BIOSAMPLE
TYPE

189 results

search-icontable-tab-icon
Clear Filters
eQTL
tissue
islet of Langerhans13
liver9
subcutaneous adipose tissue8
adipose tissue4
putamen3
primary cell
macrophage9
monocyte4
blood cell3
T cell2
articular chondrocyte2
cell line
lymphoblastoid cell line6
iPSC derived cell line2
muscle2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego