Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1657
candidate regulatory elements
1296
target gene predictions
968
histone modifications
911
chromatin state
809
binding sites
799
accessible chromatin
635
gene expression
154
eQTL
134
differential activity
128
variant allelic effects
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
pQTL
3
sQTL
2
other
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
804
September, 2022
180
February, 2024
134
May, 2021
104
November, 2021
97
January, 2022
41
March, 2020
24
February, 2020
20
August, 2021
18
January, 2021
18
May, 2020
5
September, 2023
2
February, 2021
2
May, 2024
Available data
1305
bed bed3+
25
tsv
Organism
1450
Homo sapiens
Biosample type
586
tissue
403
cell line
393
primary cell
65
in vitro differentiated cells
3
stem cell
Organ
125
epithelium
104
brain
99
connective tissue
87
musculature of body
84
embryo
79
kidney
79
lung
76
intestine
59
bodily fluid
pancreas
59
uterus
57
blood
55
heart
54
limb
47
skin of body
46
large intestine
37
extraembryonic component
37
vasculature
31
blood vessel
31
stomach
29
liver
26
adipose tissue
24
small intestine
22
adrenal gland
19
mammary gland
placenta
16
bone element
16
prostate gland
14
gonad
14
thymus
13
artery
13
esophagus
13
ureter
11
penis
11
pituitary gland
11
spinal cord
10
eye
9
lymph node
9
spleen
8
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
mouth
5
nerve
4
breast
4
vein
3
bone marrow
3
bronchus
3
lymphatic vessel
3
skeleton
3
urinary bladder
3
vagina
2
tongue
1
nose
Project
1323
AMP
104
ENCODE
18
T1D
3
ITG
2
community
Genome assembly (visualization)
1348
hg19
397
GRCh38
3
hg18
organ_slims!
pancreas
placenta
BIOSAMPLE
TYPE
1450 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
eQTL
tissue
stomach
21
1
heart
20
adrenal gland
17
1
brain
16
2
lung
17
1
+ See 131 more…
cell line
HeLa-S3
55
H1-hESC
39
K562
23
A549
19
HFFc6
19
+ See 162 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
macrophage
3
7
pericyte cell
10
+ See 168 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
dendritic cell
6
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
+ See 27 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download